HL_6QNR_170

3D structure

PDB id

6QNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome elongation complex (EC) with experimentally assigned potassium ions

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GUUAAUAUUC

Length

10 nucleotides

Bulged bases

6QNR|1|1H|U|1443, 6QNR|1|1H|U|1444

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6QNR_170 not in the Motif Atlas

Homologous match to HL_7RQB_036

Geometric discrepancy: 0.0625

The information below is about HL_7RQB_036

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69023.2

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

6QNR|1|1H|G|1436
6QNR|1|1H|U|1437
6QNR|1|1H|U|1438
6QNR|1|1H|A|1439
6QNR|1|1H|A|1440
6QNR|1|1H|U|1441
6QNR|1|1H|A|1442
6QNR|1|1H|U|1443
6QNR|1|1H|U|1444
6QNR|1|1H|C|1445

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains

Chain F8

50S ribosomal protein L23