HL_6QNR_171

3D structure

PDB id

6QNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome elongation complex (EC) with experimentally assigned potassium ions

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CAUGGACG

Length

8 nucleotides

Bulged bases

6QNR|1|1H|U|1502

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6QNR_171 not in the Motif Atlas

Homologous match to HL_7RQB_037

Geometric discrepancy: 0.106

The information below is about HL_7RQB_037

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32426.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

1

Unit IDs

6QNR|1|1H|C|1500
6QNR|1|1H|A|1501
6QNR|1|1H|U|1502
6QNR|1|1H|G|1503
6QNR|1|1H|G|1504
6QNR|1|1H|A|1505
6QNR|1|1H|C|1506
6QNR|1|1H|G|1507

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains

Chain 98

50S ribosomal protein L17