HL_6QNR_175

3D structure

PDB id

6QNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome elongation complex (EC) with experimentally assigned potassium ions

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CGACACAG

Length

8 nucleotides

Bulged bases

6QNR|1|1H|A|1661, 6QNR|1|1H|A|1663, 6QNR|1|1H|A|1665

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6QNR_175 not in the Motif Atlas

Homologous match to HL_7A0S_040

Geometric discrepancy: 0.0919

The information below is about HL_7A0S_040

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_28592.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

12

Unit IDs

6QNR|1|1H|C|1659
6QNR|1|1H|G|1660
6QNR|1|1H|A|1661
6QNR|1|1H|C|1662
6QNR|1|1H|A|1663
6QNR|1|1H|C|1664
6QNR|1|1H|A|1665
6QNR|1|1H|G|1666

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains

Chain E8

50S ribosomal protein L22

Chain P8

50S ribosomal protein L34