HL_6QNR_188

3D structure

PDB id

6QNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome elongation complex (EC) with experimentally assigned potassium ions

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CUG(OMG)GGCGG

Length

9 nucleotides

Bulged bases

6QNR|1|1H|G|2263

QA status

Modified nucleotides: OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6QNR_188 not in the Motif Atlas

Homologous match to HL_7RQB_053

Geometric discrepancy: 0.0896

The information below is about HL_7RQB_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6QNR|1|1H|C|2261
6QNR|1|1H|U|2262
6QNR|1|1H|G|2263
6QNR|1|1H|OMG|2264
6QNR|1|1H|G|2265
6QNR|1|1H|G|2266
6QNR|1|1H|C|2267
6QNR|1|1H|G|2268
6QNR|1|1H|G|2269

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains

Chain 2K

Transfer RNA; tRNA

Chain 88

50S ribosomal protein L16

Chain I8

50S ribosomal protein L27