HL_6QNR_194

3D structure

PDB id

6QNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome elongation complex (EC) with experimentally assigned potassium ions

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CGUGUGGAAG

Length

10 nucleotides

Bulged bases

6QNR|1|1H|U|2419

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6QNR_194 not in the Motif Atlas

Homologous match to HL_7RQB_059

Geometric discrepancy: 0.0754

The information below is about HL_7RQB_059

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_40210.2

Basepair signature

cWW-tSH-F

Number of instances in this motif group

12

Unit IDs

6QNR|1|1H|C|2417
6QNR|1|1H|G|2418
6QNR|1|1H|U|2419
6QNR|1|1H|G|2420
6QNR|1|1H|U|2421
6QNR|1|1H|G|2422
6QNR|1|1H|G|2423
6QNR|1|1H|A|2424
6QNR|1|1H|A|2425
6QNR|1|1H|G|2426

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains

Chain 78

50S ribosomal protein L15

Chain J8

50S ribosomal protein L28