HL_6QNR_241

3D structure

PDB id

6QNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome elongation complex (EC) with experimentally assigned potassium ions

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CCUUGG

Length

6 nucleotides

Bulged bases

6QNR|1|1G|U|189, 6QNR|1|1G|G|190

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6QNR_241 not in the Motif Atlas

Homologous match to HL_4LFB_004

Geometric discrepancy: 0.2394

The information below is about HL_4LFB_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_89167.2

Basepair signature

cWW-F-F

Number of instances in this motif group

22

Unit IDs

6QNR|1|1G|C|186|||F
6QNR|1|1G|C|187
6QNR|1|1G|U|188
6QNR|1|1G|U|189
6QNR|1|1G|G|190
6QNR|1|1G|G|191|||A

Current chains

Chain 1G

16S ribosomal RNA

Nearby chains

Chain 8A

30S ribosomal protein S17

Chain BA

30S ribosomal protein S20