HL_6QNR_242

3D structure

PDB id

6QNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome elongation complex (EC) with experimentally assigned potassium ions

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GGCUUUGCC

Length

9 nucleotides

Bulged bases

6QNR|1|1G|U|208, 6QNR|1|1G|U|210

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6QNR_242 not in the Motif Atlas

Geometric match to HL_8CRE_014

Geometric discrepancy: 0.3221

The information below is about HL_8CRE_014

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_41464.2

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

4

Unit IDs

6QNR|1|1G|G|199
6QNR|1|1G|G|200
6QNR|1|1G|C|201
6QNR|1|1G|U|208
6QNR|1|1G|U|209
6QNR|1|1G|U|210
6QNR|1|1G|G|216
6QNR|1|1G|C|217
6QNR|1|1G|C|218

Current chains

Chain 1G

16S ribosomal RNA

Nearby chains