HL_6QZP_021

3D structure

PDB id

6QZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

High-resolution cryo-EM structure of the human 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CCUCUCCAGUCCG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6QZP|1|L5|C|1436
6QZP|1|L5|C|1437
6QZP|1|L5|U|1438
6QZP|1|L5|C|1439
6QZP|1|L5|U|1440
6QZP|1|L5|C|1441
6QZP|1|L5|C|1442
6QZP|1|L5|A|1443
6QZP|1|L5|G|1444
6QZP|1|L5|U|1445
6QZP|1|L5|C|1446
6QZP|1|L5|C|1447
6QZP|1|L5|G|1448

Current chains

Chain L5

28S rRNA (3773-MER)

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LF

60S ribosomal protein L7

Chain LQ

60S ribosomal protein L18

Chain Lb

60S ribosomal protein L29