HL_6QZP_084
3D structure
- PDB id
- 6QZP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- High-resolution cryo-EM structure of the human 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUA(A2M)UUC
- Length
- 7 nucleotides
- Bulged bases
- 6QZP|1|S2|A|158, 6QZP|1|S2|U|161
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6QZP_084 not in the Motif Atlas
- Homologous match to HL_4V88_188
- Geometric discrepancy: 0.146
- The information below is about HL_4V88_188
- Detailed Annotation
- GNRA related
- Broad Annotation
- GNRA related
- Motif group
- HL_37824.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 360
Unit IDs
6QZP|1|S2|G|156
6QZP|1|S2|U|157
6QZP|1|S2|A|158
6QZP|1|S2|A2M|159
6QZP|1|S2|U|160
6QZP|1|S2|U|161
6QZP|1|S2|C|162
Current chains
- Chain S2
- 18S rRNA (1740-MER)
Nearby chains
- Chain SG
- 40S ribosomal protein S6
- Chain SY
- 40S ribosomal protein S24
Coloring options: