HL_6R5Q_022
3D structure
- PDB id
- 6R5Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of XBP1u-paused ribosome nascent chain complex (post-state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UACGAAA
- Length
- 7 nucleotides
- Bulged bases
- 6R5Q|1|5|A|1371
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6R5Q_022 not in the Motif Atlas
- Geometric match to HL_8C3A_022
- Geometric discrepancy: 0.3041
- The information below is about HL_8C3A_022
- Detailed Annotation
- Externally structured
- Broad Annotation
- Externally structured
- Motif group
- HL_96426.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 4
Unit IDs
6R5Q|1|5|U|1364
6R5Q|1|5|A|1368
6R5Q|1|5|C|1369
6R5Q|1|5|G|1370
6R5Q|1|5|A|1371
6R5Q|1|5|A|1372
6R5Q|1|5|A|1373
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain C
- uL4
- Chain L
- 60S ribosomal protein L13
- Chain N
- Ribosomal protein L15
- Chain Y
- Ribosomal protein L26
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