HL_6R5Q_043
3D structure
- PDB id
- 6R5Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of XBP1u-paused ribosome nascent chain complex (post-state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CGCGAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6R5Q_043 not in the Motif Atlas
- Geometric match to HL_5J7L_191
- Geometric discrepancy: 0.1271
- The information below is about HL_5J7L_191
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.8
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 352
Unit IDs
6R5Q|1|5|C|2561
6R5Q|1|5|G|2562
6R5Q|1|5|C|2563
6R5Q|1|5|G|2564
6R5Q|1|5|A|2565
6R5Q|1|5|G|2566
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: