HL_6R5Q_092
3D structure
- PDB id
- 6R5Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of XBP1u-paused ribosome nascent chain complex (post-state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UCAGGG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6R5Q_092 not in the Motif Atlas
- Homologous match to HL_4V88_194
- Geometric discrepancy: 0.228
- The information below is about HL_4V88_194
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50142.3
- Basepair signature
- cWW-cWW-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
6R5Q|1|K|U|416
6R5Q|1|K|C|417
6R5Q|1|K|A|418
6R5Q|1|K|G|419
6R5Q|1|K|G|420
6R5Q|1|K|G|421
Current chains
- Chain K
- 18S ribosomal RNA
Nearby chains
- Chain DD
- Ribosomal protein S9 (Predicted)
- Chain EE
- Ribosomal protein S11
- Chain TT
- Ribosomal protein S15a
- Chain VV
- Ribosomal protein S23
- Chain v
- uS5
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