HL_6R5Q_119
3D structure
- PDB id
- 6R5Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of XBP1u-paused ribosome nascent chain complex (post-state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GCUCAUAAU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6R5Q_119 not in the Motif Atlas
- Homologous match to HL_4WZD_238
- Geometric discrepancy: 0.1243
- The information below is about HL_4WZD_238
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.3
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 46
Unit IDs
6R5Q|1|2|G|31
6R5Q|1|2|C|32
6R5Q|1|2|U|33
6R5Q|1|2|C|34
6R5Q|1|2|A|35
6R5Q|1|2|U|36
6R5Q|1|2|A|37
6R5Q|1|2|A|38
6R5Q|1|2|U|39
Current chains
- Chain 2
- P-tRNA
Nearby chains
- Chain 3
- Transfer RNA; tRNA
- Chain 4
- mRNA
- Chain K
- Small subunit ribosomal RNA; SSU rRNA
- Chain UU
- Ribosomal protein S16
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