HL_6R6G_064
3D structure
- PDB id
- 6R6G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of XBP1u-paused ribosome nascent chain complex with SRP.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UUCAGUACG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6R6G_064 not in the Motif Atlas
- Homologous match to HL_8C3A_059
- Geometric discrepancy: 0.203
- The information below is about HL_8C3A_059
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_34636.1
- Basepair signature
- cWW-cWW-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
6R6G|1|5|U|2871
6R6G|1|5|U|2872
6R6G|1|5|C|2873
6R6G|1|5|A|2874
6R6G|1|5|G|2875
6R6G|1|5|U|2876
6R6G|1|5|A|2877
6R6G|1|5|C|2878
6R6G|1|5|G|2879
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain Q
- eL18
- Chain T
- eL21
- Chain a
- uL15
- Chain o
- eL42
Coloring options: