3D structure

PDB id
6R6G (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of XBP1u-paused ribosome nascent chain complex with SRP.
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
CCG
Length
3 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6R6G_103 not in the Motif Atlas
Geometric match to HL_8H9D_001
Geometric discrepancy: 0.347
The information below is about HL_8H9D_001
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_69752.1
Basepair signature
cWW-F
Number of instances in this motif group
8

Unit IDs

6R6G|1|K|C|833
6R6G|1|K|C|834
6R6G|1|K|G|841

Current chains

Chain K
18S ribosomal RNA

Nearby chains

Chain NN
40S ribosomal protein S24
Chain x
40S ribosomal protein S4

Coloring options:


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