HL_6R6G_133
3D structure
- PDB id
- 6R6G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of XBP1u-paused ribosome nascent chain complex with SRP.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UCAAACGGUAACG
- Length
- 13 nucleotides
- Bulged bases
- 6R6G|1|5|A|2784, 6R6G|1|5|C|2791
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6R6G_133 not in the Motif Atlas
- Homologous match to HL_8P9A_166
- Geometric discrepancy: 0.1067
- The information below is about HL_8P9A_166
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_91939.2
- Basepair signature
- cWW-tSH-tHH-tWW-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
6R6G|1|5|U|2780
6R6G|1|5|C|2781
6R6G|1|5|A|2782
6R6G|1|5|A|2783
6R6G|1|5|A|2784
6R6G|1|5|C|2785
6R6G|1|5|G|2786
6R6G|1|5|G|2787
6R6G|1|5|U|2788
6R6G|1|5|A|2789
6R6G|1|5|A|2790
6R6G|1|5|C|2791
6R6G|1|5|G|2792
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain I
- Ribosomal protein L10 (Predicted)
- Chain T
- eL21
- Chain b
- eL29
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