HL_8P9A_166

3D structure

PDB id

8P9A (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S yeast ribosome in complex with Methyllissoclimide

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

UUAAACGAUAACG

Length

13 nucleotides

Bulged bases

8P9A|1|AR|A|2637, 8P9A|1|AR|C|2644

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91939.2

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

8

Unit IDs

8P9A|1|AR|U|2633
8P9A|1|AR|U|2634
8P9A|1|AR|A|2635
8P9A|1|AR|A|2636
8P9A|1|AR|A|2637
8P9A|1|AR|C|2638
8P9A|1|AR|G|2639
8P9A|1|AR|A|2640
8P9A|1|AR|U|2641
8P9A|1|AR|A|2642
8P9A|1|AR|A|2643
8P9A|1|AR|C|2644
8P9A|1|AR|G|2645

Current chains

Chain AR

25S ribosomal RNA

Nearby chains

Chain CL

60S ribosomal protein L10

Chain CV

60S ribosomal protein L21-A

Chain DD

60S ribosomal protein L29