HL_6R6P_094
3D structure
- PDB id
- 6R6P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of XBP1u-paused ribosome nascent chain complex (rotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CCUGAGAAACGG
- Length
- 12 nucleotides
- Bulged bases
- 6R6P|1|K|C|450, 6R6P|1|K|G|451
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6R6P_094 not in the Motif Atlas
- Homologous match to HL_4V88_195
- Geometric discrepancy: 0.1536
- The information below is about HL_4V88_195
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_06226.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
6R6P|1|K|C|441
6R6P|1|K|C|442
6R6P|1|K|U|443
6R6P|1|K|G|444
6R6P|1|K|A|445
6R6P|1|K|G|446
6R6P|1|K|A|447
6R6P|1|K|A|448
6R6P|1|K|A|449
6R6P|1|K|C|450
6R6P|1|K|G|451
6R6P|1|K|G|452
Current chains
- Chain K
- 18S rRNA
Nearby chains
- Chain CC
- 40S ribosomal protein S8
- Chain NN
- eS24
- Chain x
- 40S ribosomal protein S4
- Chain z
- 40S ribosomal protein S6
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