HL_6R7Q_001
3D structure
- PDB id
- 6R7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of XBP1u-paused ribosome nascent chain complex with Sec61.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CAGCGGCAG
- Length
- 9 nucleotides
- Bulged bases
- 6R7Q|1|2|C|16, 6R7Q|1|2|G|18, 6R7Q|1|2|G|19
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6R7Q_001 not in the Motif Atlas
- Homologous match to HL_6PMO_003
- Geometric discrepancy: 0.1369
- The information below is about HL_6PMO_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6R7Q|1|2|C|13
6R7Q|1|2|A|14
6R7Q|1|2|G|15
6R7Q|1|2|C|16
6R7Q|1|2|G|18
6R7Q|1|2|G|19
6R7Q|1|2|C|20
6R7Q|1|2|A|21
6R7Q|1|2|G|22
Current chains
- Chain 2
- P-tRNA
Nearby chains
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain J
- Ribosomal protein L11
- Chain o
- eL42
Coloring options: