HL_6RBE_013

3D structure

PDB id

6RBE (explore in PDB, NAKB, or RNA 3D Hub)

Description

State 2 of yeast Tsr1-TAP Rps20-Deltaloop pre-40S particles

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGCCCAUUCGGGUC

Length

14 nucleotides

Bulged bases

6RBE|1|2|C|495

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6RBE|1|2|G|487
6RBE|1|2|G|488
6RBE|1|2|C|489
6RBE|1|2|C|490
6RBE|1|2|C|491
6RBE|1|2|A|492
6RBE|1|2|U|493
6RBE|1|2|U|494
6RBE|1|2|C|495
6RBE|1|2|G|496
6RBE|1|2|G|497
6RBE|1|2|G|498
6RBE|1|2|U|499
6RBE|1|2|C|500

Current chains

Chain 2

18S ribosomal RNA

Nearby chains