HL_6RM3_010

3D structure

PDB id

6RM3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

AUUUUU

Length

6 nucleotides

Bulged bases

6RM3|1|L50|U|422, 6RM3|1|L50|U|423, 6RM3|1|L50|U|425

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6RM3_010 not in the Motif Atlas

Geometric match to HL_1ZBH_001

Geometric discrepancy: 0.2228

The information below is about HL_1ZBH_001

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_12626.2

Basepair signature

cWW-F

Number of instances in this motif group

17

Unit IDs

6RM3|1|L50|A|421
6RM3|1|L50|U|422
6RM3|1|L50|U|423
6RM3|1|L50|U|424
6RM3|1|L50|U|425
6RM3|1|L50|U|426

Current chains

Chain L50

23S rRNA

Nearby chains

Chain LEE

eL32

Chain LFF

eL33

Chain LO0

uL13