HL_6RM3_013

3D structure

PDB id

6RM3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

AUUAACUU

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6RM3_013 not in the Motif Atlas

Geometric match to HL_1E8O_001

Geometric discrepancy: 0.2215

The information below is about HL_1E8O_001

Detailed Annotation

GNRA wlth tandem sheared

Broad Annotation

No text annotation

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

6RM3|1|L50|A|500
6RM3|1|L50|U|501
6RM3|1|L50|U|502
6RM3|1|L50|A|503
6RM3|1|L50|A|504
6RM3|1|L50|C|505
6RM3|1|L50|U|506
6RM3|1|L50|U|507

Current chains

Chain L50

23S rRNA

Nearby chains

Chain LAA

uL15

Chain LII

eL36

Chain LQ0

eL18