HL_6RM3_017

3D structure

PDB id

6RM3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UCUCAG

Length

6 nucleotides

Bulged bases

6RM3|1|L50|C|685, 6RM3|1|L50|A|688

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6RM3_017 not in the Motif Atlas

Geometric match to HL_7RQB_025

Geometric discrepancy: 0.3236

The information below is about HL_7RQB_025

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53619.1

Basepair signature

cWW-F-F

Number of instances in this motif group

11

Unit IDs

6RM3|1|L50|U|684
6RM3|1|L50|C|685
6RM3|1|L50|U|686
6RM3|1|L50|C|687
6RM3|1|L50|A|688
6RM3|1|L50|G|689

Current chains

Chain L50

23S rRNA

Nearby chains

Chain LAA

uL15

Chain LBB

eL29

Chain LOO

eL42