HL_6RM3_020

3D structure

PDB id

6RM3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GGAUGAAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6RM3_020 not in the Motif Atlas

Homologous match to HL_5TBW_026

Geometric discrepancy: 0.1315

The information below is about HL_5TBW_026

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_44398.1

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

6RM3|1|L50|G|850
6RM3|1|L50|G|851
6RM3|1|L50|A|852
6RM3|1|L50|U|853
6RM3|1|L50|G|854
6RM3|1|L50|A|855
6RM3|1|L50|A|856
6RM3|1|L50|C|857

Current chains

Chain L50

23S rRNA

Nearby chains

Chain L70

5S ribosomal RNA; 5S rRNA

Chain LEE

eL32

Chain LFF

eL33