HL_6RM3_021

3D structure

PDB id

6RM3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

AAUAUUU

Length

7 nucleotides

Bulged bases

6RM3|1|L50|U|1044, 6RM3|1|L50|U|1046, 6RM3|1|L50|U|1047

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6RM3_021 not in the Motif Atlas

Geometric match to HL_5T16_002

Geometric discrepancy: 0.3448

The information below is about HL_5T16_002

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_12626.2

Basepair signature

cWW-F

Number of instances in this motif group

17

Unit IDs

6RM3|1|L50|A|1038
6RM3|1|L50|A|1039
6RM3|1|L50|U|1044
6RM3|1|L50|A|1045
6RM3|1|L50|U|1046
6RM3|1|L50|U|1047
6RM3|1|L50|U|1048

Current chains

Chain L50

23S rRNA

Nearby chains

Chain LC0

uL4

Chain LEE

eL32

Chain LF0

uL30

Chain LQ0

eL18