HL_6RM3_050

3D structure

PDB id

6RM3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UGUAUAUG

Length

8 nucleotides

Bulged bases

6RM3|1|L50|G|2167

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6RM3_050 not in the Motif Atlas

Homologous match to HL_5TBW_062

Geometric discrepancy: 0.1612

The information below is about HL_5TBW_062

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_79150.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

12

Unit IDs

6RM3|1|L50|U|2166
6RM3|1|L50|G|2167
6RM3|1|L50|U|2168
6RM3|1|L50|A|2169
6RM3|1|L50|U|2170
6RM3|1|L50|A|2171
6RM3|1|L50|U|2172
6RM3|1|L50|G|2173

Current chains

Chain L50

23S rRNA

Nearby chains

Chain LH0

uL6

Chain LMM

eL40