HL_6RM3_054

3D structure

PDB id

6RM3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UAUUAA

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6RM3_054 not in the Motif Atlas

Homologous match to HL_8C3A_067

Geometric discrepancy: 0.3097

The information below is about HL_8C3A_067

Detailed Annotation

Ribsomal LSU H95

Broad Annotation

Ribsomal LSU H95

Motif group

HL_65794.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

11

Unit IDs

6RM3|1|L50|U|2331
6RM3|1|L50|A|2332
6RM3|1|L50|U|2333
6RM3|1|L50|U|2334
6RM3|1|L50|A|2335
6RM3|1|L50|A|2336

Current chains

Chain L50

23S rRNA

Nearby chains

Chain LDD

eL31

Chain LR0

eL19

Chain LU0

eL22