HL_6RM3_057

3D structure

PDB id

6RM3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UGUAUG

Length

6 nucleotides

Bulged bases

6RM3|1|L50|U|2460

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6RM3_057 not in the Motif Atlas

Geometric match to HL_4UYK_003

Geometric discrepancy: 0.1871

The information below is about HL_4UYK_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_51020.2

Basepair signature

cWW-cSW-F

Number of instances in this motif group

14

Unit IDs

6RM3|1|L50|U|2456
6RM3|1|L50|G|2457
6RM3|1|L50|U|2458
6RM3|1|L50|A|2459
6RM3|1|L50|U|2460
6RM3|1|L50|G|2461

Current chains

Chain L50

23S rRNA

Nearby chains

Chain LU0

eL22

Chain SI0

eS8