HL_6RW4_014

3D structure

PDB id

6RW4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human mitochondrial 28S ribosome in complex with mitochondrial IF3

Experimental method

ELECTRON MICROSCOPY

Resolution

2.97 Å

Loop

Sequence

GAUAAACCCC

Length

10 nucleotides

Bulged bases

6RW4|1|A|C|1225

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6RW4_014 not in the Motif Atlas

Homologous match to HL_5J7L_021

Geometric discrepancy: 0.2904

The information below is about HL_5J7L_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50779.4

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

4

Unit IDs

6RW4|1|A|G|1217
6RW4|1|A|A|1218
6RW4|1|A|U|1219
6RW4|1|A|A|1220
6RW4|1|A|A|1221
6RW4|1|A|A|1222
6RW4|1|A|C|1223
6RW4|1|A|C|1224
6RW4|1|A|C|1225
6RW4|1|A|C|1226

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain G

28S ribosomal protein S9, mitochondrial

Chain H

28S ribosomal protein S10, mitochondrial