HL_6RW5_014

3D structure

PDB id

6RW5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human mitochondrial 28S ribosome in complex with mitochondrial IF2 and IF3

Experimental method

ELECTRON MICROSCOPY

Resolution

3.14 Å

Loop

Sequence

GAUAAACCCC

Length

10 nucleotides

Bulged bases

6RW5|1|A|C|1225

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6RW5_014 not in the Motif Atlas

Homologous match to HL_5J7L_021

Geometric discrepancy: 0.2848

The information below is about HL_5J7L_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50779.4

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

4

Unit IDs

6RW5|1|A|G|1217
6RW5|1|A|A|1218
6RW5|1|A|U|1219
6RW5|1|A|A|1220
6RW5|1|A|A|1221
6RW5|1|A|A|1222
6RW5|1|A|C|1223
6RW5|1|A|C|1224
6RW5|1|A|C|1225
6RW5|1|A|C|1226

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain G

28S ribosomal protein S9, mitochondrial

Chain H

28S ribosomal protein S10, mitochondrial