HL_6RZZ_037
3D structure
- PDB id
- 6RZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GUUAUCUUU
- Length
- 9 nucleotides
- Bulged bases
- 6RZZ|1|A|U|1687
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6RZZ_037 not in the Motif Atlas
- Homologous match to HL_5TBW_037
- Geometric discrepancy: 0.1024
- The information below is about HL_5TBW_037
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_01927.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
6RZZ|1|A|G|1680
6RZZ|1|A|U|1681
6RZZ|1|A|U|1682
6RZZ|1|A|A|1683
6RZZ|1|A|U|1684
6RZZ|1|A|C|1685
6RZZ|1|A|U|1686
6RZZ|1|A|U|1687
6RZZ|1|A|U|1688
Current chains
- Chain A
- 25S ribosomal RNA
Nearby chains
- Chain R
- 60S ribosomal protein L19-A
- Chain V
- 60S ribosomal protein L22-A
- Chain u
- Cytoplasmic 60S subunit biogenesis factor REI1
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