HL_6RZZ_043

3D structure

PDB id

6RZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

6RZZ|1|A|U|1925

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6RZZ_043 not in the Motif Atlas

Geometric match to HL_7RQB_042

Geometric discrepancy: 0.105

The information below is about HL_7RQB_042

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_03562.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

56

Unit IDs

6RZZ|1|A|C|1923
6RZZ|1|A|U|1924
6RZZ|1|A|U|1925
6RZZ|1|A|C|1926
6RZZ|1|A|G|1927
6RZZ|1|A|G|1928

Current chains

Chain A

25S ribosomal RNA

Nearby chains

Chain m

60S ribosomal protein L43-A

Chain o

Large subunit GTPase 1