HL_6S05_001
3D structure
- PDB id
- 6S05 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CUGAACUUAAGCAUAUCAAUAAG
- Length
- 23 nucleotides
- Bulged bases
- 6S05|1|A|A|40, 6S05|1|A|A|43, 6S05|1|A|A|49
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6S05|1|A|C|31
6S05|1|A|U|32
6S05|1|A|G|33
6S05|1|A|A|34
6S05|1|A|A|35
6S05|1|A|C|36
6S05|1|A|U|37
6S05|1|A|U|38
6S05|1|A|A|39
6S05|1|A|A|40
6S05|1|A|G|41
6S05|1|A|C|42
6S05|1|A|A|43
6S05|1|A|U|44
6S05|1|A|A|45
6S05|1|A|U|46
6S05|1|A|C|47
6S05|1|A|A|48
6S05|1|A|A|49
6S05|1|A|U|50
6S05|1|A|A|51
6S05|1|A|A|52
6S05|1|A|G|53
Current chains
- Chain A
- 25S ribosomal RNA
Nearby chains
- Chain K
- 60S ribosomal protein L13-A
- Chain N
- 60S ribosomal protein L28
- Chain O
- 60S ribosomal protein L15-A
- Chain i
- 60S ribosomal protein L37-A
- Chain l
- 60S ribosomal protein L42-A
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