HL_6S05_037
3D structure
- PDB id
- 6S05 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- AGUUAUCUUUU
- Length
- 11 nucleotides
- Bulged bases
- 6S05|1|A|U|1687
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6S05_037 not in the Motif Atlas
- Geometric match to HL_1KH6_003
- Geometric discrepancy: 0.2825
- The information below is about HL_1KH6_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_05426.1
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 2
Unit IDs
6S05|1|A|A|1679
6S05|1|A|G|1680
6S05|1|A|U|1681
6S05|1|A|U|1682
6S05|1|A|A|1683
6S05|1|A|U|1684
6S05|1|A|C|1685
6S05|1|A|U|1686
6S05|1|A|U|1687
6S05|1|A|U|1688
6S05|1|A|U|1689
Current chains
- Chain A
- 25S ribosomal RNA
Nearby chains
- Chain R
- 60S ribosomal protein L19-A
- Chain V
- 60S ribosomal protein L22-A
Coloring options: