HL_6S05_068

3D structure

PDB id

6S05 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UUUGUAUACGACUUA

Length

15 nucleotides

Bulged bases

6S05|1|A|U|3304

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6S05|1|A|U|3300
6S05|1|A|U|3301
6S05|1|A|U|3302
6S05|1|A|G|3303
6S05|1|A|U|3304
6S05|1|A|A|3305
6S05|1|A|U|3306
6S05|1|A|A|3307
6S05|1|A|C|3308
6S05|1|A|G|3309
6S05|1|A|A|3310
6S05|1|A|C|3311
6S05|1|A|U|3312
6S05|1|A|U|3313
6S05|1|A|A|3314

Current chains

Chain A

25S ribosomal RNA

Nearby chains

Chain C

60S ribosomal protein L3

Chain U

60S ribosomal protein L17-A

Chain d

60S ribosomal protein L31-A