HL_6S05_076
3D structure
- PDB id
- 6S05 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GGGGUCGAAAUGACCUU
- Length
- 17 nucleotides
- Bulged bases
- 6S05|1|A|A|1025, 6S05|1|A|A|1027
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6S05|1|A|G|1018
6S05|1|A|G|1019
6S05|1|A|G|1020
6S05|1|A|G|1021
6S05|1|A|U|1022
6S05|1|A|C|1023
6S05|1|A|G|1024
6S05|1|A|A|1025
6S05|1|A|A|1026
6S05|1|A|A|1027
6S05|1|A|U|1028
6S05|1|A|G|1029
6S05|1|A|A|1030
6S05|1|A|C|1031
6S05|1|A|C|1032
6S05|1|A|U|1033
6S05|1|A|U|1034
Current chains
- Chain A
- 25S ribosomal RNA
Nearby chains
- Chain E
- 60S ribosomal protein L11-A
- Chain w
- 60S ribosomal export protein NMD3
Coloring options: