HL_6S05_080
3D structure
- PDB id
- 6S05 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GUUAAACGAUAACGC
- Length
- 15 nucleotides
- Bulged bases
- 6S05|1|A|A|2637, 6S05|1|A|C|2644
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6S05|1|A|G|2632
6S05|1|A|U|2633
6S05|1|A|U|2634
6S05|1|A|A|2635
6S05|1|A|A|2636
6S05|1|A|A|2637
6S05|1|A|C|2638
6S05|1|A|G|2639
6S05|1|A|A|2640
6S05|1|A|U|2641
6S05|1|A|A|2642
6S05|1|A|A|2643
6S05|1|A|C|2644
6S05|1|A|G|2645
6S05|1|A|C|2646
Current chains
- Chain A
- 25S ribosomal RNA
Nearby chains
- Chain T
- 60S ribosomal protein L21-A
- Chain a
- 60S ribosomal protein L29
- Chain w
- 60S ribosomal export protein NMD3
Coloring options: