HL_6S0K_073

3D structure

PDB id

6S0K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome nascent chain in complex with SecA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UUCG

Length

4 nucleotides

Bulged bases

6S0K|1|A|U|139

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6S0K_073 not in the Motif Atlas

Geometric match to HL_5J7L_176

Geometric discrepancy: 0.3222

The information below is about HL_5J7L_176

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32346.4

Basepair signature

cWW-F

Number of instances in this motif group

9

Unit IDs

6S0K|1|A|U|138
6S0K|1|A|U|139
6S0K|1|A|C|140
6S0K|1|A|G|141

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain U

50S ribosomal protein L23

Chain h

Protein translocase subunit SecA