HL_6S0X_024

3D structure

PDB id

6S0X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22) in complex with erythromycin.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.42 Å

Loop

Sequence

UUUAGG

Length

6 nucleotides

Bulged bases

6S0X|1|A|U|872, 6S0X|1|A|G|875

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6S0X_024 not in the Motif Atlas

Geometric match to HL_4WF9_037

Geometric discrepancy: 0.3602

The information below is about HL_4WF9_037

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_48778.2

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

6S0X|1|A|U|871
6S0X|1|A|U|872
6S0X|1|A|U|873
6S0X|1|A|A|874
6S0X|1|A|G|875
6S0X|1|A|G|876

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain J

50S ribosomal protein L15