HL_6S0X_027

3D structure

PDB id

6S0X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22) in complex with erythromycin.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.42 Å

Loop

Sequence

GAAACAGC

Length

8 nucleotides

Bulged bases

6S0X|1|A|A|1024, 6S0X|1|A|A|1027, 6S0X|1|A|G|1028

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6S0X|1|A|G|1022
6S0X|1|A|A|1023
6S0X|1|A|A|1024
6S0X|1|A|A|1025
6S0X|1|A|C|1026
6S0X|1|A|A|1027
6S0X|1|A|G|1028
6S0X|1|A|C|1029

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain B

5S ribosomal RNA; 5S rRNA

Chain O

50S ribosomal protein L20

Chain P

50S ribosomal protein L21

Chain X

50S ribosomal protein L30