HL_6S0X_028

3D structure

PDB id

6S0X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22) in complex with erythromycin.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.42 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

6S0X|1|A|U|1109, 6S0X|1|A|A|1111, 6S0X|1|A|A|1114, 6S0X|1|A|G|1115, 6S0X|1|A|C|1116

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6S0X|1|A|C|1108
6S0X|1|A|U|1109
6S0X|1|A|U|1110
6S0X|1|A|A|1111
6S0X|1|A|G|1112
6S0X|1|A|A|1113
6S0X|1|A|A|1114
6S0X|1|A|G|1115
6S0X|1|A|C|1116
6S0X|1|A|A|1117
6S0X|1|A|G|1118

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 4

50S ribosomal protein L36