HL_6S0X_035
3D structure
- PDB id
- 6S0X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22) in complex with erythromycin.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.42 Å
Loop
- Sequence
- GCAAAUC
- Length
- 7 nucleotides
- Bulged bases
- 6S0X|1|A|C|1536, 6S0X|1|A|U|1540
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6S0X_035 not in the Motif Atlas
- Homologous match to HL_5J7L_170
- Geometric discrepancy: 0.3941
- The information below is about HL_5J7L_170
- Detailed Annotation
- Pseudoknot geometry with 3' bulge
- Broad Annotation
- No text annotation
- Motif group
- HL_57176.2
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 14
Unit IDs
6S0X|1|A|G|1535
6S0X|1|A|C|1536
6S0X|1|A|A|1537
6S0X|1|A|A|1538
6S0X|1|A|A|1539
6S0X|1|A|U|1540
6S0X|1|A|C|1541
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
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