HL_6S0X_037

3D structure

PDB id

6S0X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22) in complex with erythromycin.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.42 Å

Loop

Sequence

CGACACAG

Length

8 nucleotides

Bulged bases

6S0X|1|A|A|1660, 6S0X|1|A|A|1662

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6S0X_037 not in the Motif Atlas

Homologous match to HL_7RQB_040

Geometric discrepancy: 0.1203

The information below is about HL_7RQB_040

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64430.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

13

Unit IDs

6S0X|1|A|C|1656
6S0X|1|A|G|1657
6S0X|1|A|A|1658
6S0X|1|A|C|1659
6S0X|1|A|A|1660
6S0X|1|A|C|1661
6S0X|1|A|A|1662
6S0X|1|A|G|1663

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34

Chain Q

50S ribosomal protein L22