3D structure

PDB id
6S0X (explore in PDB, NAKB, or RNA 3D Hub)
Description
Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22) in complex with erythromycin.
Experimental method
ELECTRON MICROSCOPY
Resolution
2.42 Å

Loop

Sequence
AGAAAUU
Length
7 nucleotides
Bulged bases
6S0X|1|A|A|826
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6S0X_101 not in the Motif Atlas
Homologous match to HL_4WF9_024
Geometric discrepancy: 0.0956
The information below is about HL_4WF9_024
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_87954.2
Basepair signature
cWW-tSW-F
Number of instances in this motif group
7

Unit IDs

6S0X|1|A|A|824
6S0X|1|A|G|825
6S0X|1|A|A|826
6S0X|1|A|A|827
6S0X|1|A|A|828
6S0X|1|A|U|829
6S0X|1|A|U|830

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain C
50S ribosomal protein L2

Coloring options:


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