HL_6S12_012

3D structure

PDB id

6S12 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin Resistant Staphylococcus aureus 50S ribosome (delta R88 A89 uL22).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GAGCACGUGAAAUUC

Length

15 nucleotides

Bulged bases

6S12|1|A|G|432

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6S12|1|A|G|426
6S12|1|A|A|427
6S12|1|A|G|428
6S12|1|A|C|429
6S12|1|A|A|430
6S12|1|A|C|431
6S12|1|A|G|432
6S12|1|A|U|433
6S12|1|A|G|434
6S12|1|A|A|435
6S12|1|A|A|436
6S12|1|A|A|437
6S12|1|A|U|438
6S12|1|A|U|439
6S12|1|A|C|440

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain V

50S ribosomal protein L28