HL_6S12_028

3D structure

PDB id

6S12 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin Resistant Staphylococcus aureus 50S ribosome (delta R88 A89 uL22).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUUGGCUUAGAAGCAGCCAUC

Length

21 nucleotides

Bulged bases

6S12|1|A|A|1114, 6S12|1|A|G|1115, 6S12|1|A|C|1116, 6S12|1|A|U|1122

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6S12|1|A|G|1103
6S12|1|A|U|1104
6S12|1|A|U|1105
6S12|1|A|G|1106
6S12|1|A|G|1107
6S12|1|A|C|1108
6S12|1|A|U|1109
6S12|1|A|U|1110
6S12|1|A|A|1111
6S12|1|A|G|1112
6S12|1|A|A|1113
6S12|1|A|A|1114
6S12|1|A|G|1115
6S12|1|A|C|1116
6S12|1|A|A|1117
6S12|1|A|G|1118
6S12|1|A|C|1119
6S12|1|A|C|1120
6S12|1|A|A|1121
6S12|1|A|U|1122
6S12|1|A|C|1123

Current chains

Chain A

23S ribosomal RNA

Nearby chains