HL_6S13_080
3D structure
- PDB id
- 6S13 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.58 Å
Loop
- Sequence
- GUGAUGAAGGUCUUCGGAUCGUAAAAC
- Length
- 27 nucleotides
- Bulged bases
- 6S13|1|a|A|419, 6S13|1|a|U|420, 6S13|1|a|U|429
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6S13|1|a|G|416
6S13|1|a|U|417
6S13|1|a|G|418
6S13|1|a|A|419
6S13|1|a|U|420
6S13|1|a|G|421
6S13|1|a|A|422
6S13|1|a|A|423
6S13|1|a|G|424
6S13|1|a|G|425
6S13|1|a|U|426
6S13|1|a|C|427
6S13|1|a|U|428
6S13|1|a|U|429
6S13|1|a|C|430
6S13|1|a|G|431
6S13|1|a|G|432
6S13|1|a|A|433
6S13|1|a|U|434
6S13|1|a|C|435
6S13|1|a|G|436
6S13|1|a|U|437
6S13|1|a|A|438
6S13|1|a|A|439
6S13|1|a|A|440
6S13|1|a|A|441
6S13|1|a|C|442
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain c
- 30S ribosomal protein S3
- Chain d
- 30S ribosomal protein S4
Coloring options: