HL_6S13_094
3D structure
- PDB id
- 6S13 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.58 Å
Loop
- Sequence
- GUUAAGUC
- Length
- 8 nucleotides
- Bulged bases
- 6S13|1|a|U|1102, 6S13|1|a|A|1103, 6S13|1|a|A|1104, 6S13|1|a|G|1105, 6S13|1|a|U|1106
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6S13_094 not in the Motif Atlas
- Geometric match to HL_5NFV_001
- Geometric discrepancy: 0.3588
- The information below is about HL_5NFV_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_69752.2
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 7
Unit IDs
6S13|1|a|G|1100
6S13|1|a|U|1101
6S13|1|a|U|1102
6S13|1|a|A|1103
6S13|1|a|A|1104
6S13|1|a|G|1105
6S13|1|a|U|1106
6S13|1|a|C|1107
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain b
- 30S ribosomal protein S2
- Chain c
- 30S ribosomal protein S3
- Chain e
- 30S ribosomal protein S5
- Chain n
- 30S ribosomal protein S14 type Z
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