HL_6S13_100

3D structure

PDB id

6S13 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.58 Å

Loop

Sequence

GUAACCUUUUAGGAGC

Length

16 nucleotides

Bulged bases

6S13|1|a|A|1456, 6S13|1|a|A|1457, 6S13|1|a|C|1458, 6S13|1|a|C|1459

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6S13|1|a|G|1454
6S13|1|a|U|1455
6S13|1|a|A|1456
6S13|1|a|A|1457
6S13|1|a|C|1458
6S13|1|a|C|1459
6S13|1|a|U|1460
6S13|1|a|U|1461
6S13|1|a|U|1462
6S13|1|a|U|1463
6S13|1|a|A|1464
6S13|1|a|G|1465
6S13|1|a|G|1466
6S13|1|a|A|1467
6S13|1|a|G|1468
6S13|1|a|C|1469

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain t

30S ribosomal protein S20