HL_6S13_104
3D structure
- PDB id
- 6S13 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.58 Å
Loop
- Sequence
- GAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAGUGCGUAAUAGCUCAC
- Length
- 49 nucleotides
- Bulged bases
- 6S13|1|A|U|1102, 6S13|1|A|U|1109, 6S13|1|A|A|1114, 6S13|1|A|C|1116, 6S13|1|A|A|1117, 6S13|1|A|A|1121, 6S13|1|A|U|1122, 6S13|1|A|U|1127, 6S13|1|A|G|1131, 6S13|1|A|G|1133, 6S13|1|A|U|1138
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6S13|1|A|G|1100
6S13|1|A|A|1101
6S13|1|A|U|1102
6S13|1|A|G|1103
6S13|1|A|U|1104
6S13|1|A|U|1105
6S13|1|A|G|1106
6S13|1|A|G|1107
6S13|1|A|C|1108
6S13|1|A|U|1109
6S13|1|A|U|1110
6S13|1|A|A|1111
6S13|1|A|G|1112
6S13|1|A|A|1113
6S13|1|A|A|1114
6S13|1|A|G|1115
6S13|1|A|C|1116
6S13|1|A|A|1117
6S13|1|A|G|1118
6S13|1|A|C|1119
6S13|1|A|C|1120
6S13|1|A|A|1121
6S13|1|A|U|1122
6S13|1|A|C|1123
6S13|1|A|A|1124
6S13|1|A|U|1125
6S13|1|A|U|1126
6S13|1|A|U|1127
6S13|1|A|A|1128
6S13|1|A|A|1129
6S13|1|A|A|1130
6S13|1|A|G|1131
6S13|1|A|A|1132
6S13|1|A|G|1133
6S13|1|A|U|1134
6S13|1|A|G|1135
6S13|1|A|C|1136
6S13|1|A|G|1137
6S13|1|A|U|1138
6S13|1|A|A|1139
6S13|1|A|A|1140
6S13|1|A|U|1141
6S13|1|A|A|1142
6S13|1|A|G|1143
6S13|1|A|C|1144
6S13|1|A|U|1145
6S13|1|A|C|1146
6S13|1|A|A|1147
6S13|1|A|C|1148
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 4
- 50S ribosomal protein L36
- Chain G
- 50S ribosomal protein L6
Coloring options: